PROBLEM: | CAUSE: | ANSWER: |
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Received source plates and worms do not move when observed through a microscope | Worms could die from extreme temperatures during shipping. | Acquire new plate of worms. |
Worms are dormant. | Feed the worms by adding one BactoBeads™ to 1ml of LB or water. Grow the bacteria for one hour at 37˚C. Add 200 µl of the culture to each plate. |
Stored the source plates at 4˚C for a week, and they don't move | Worms are dormant. | Feed the worms by adding one BActoBead™ to 1ml of LB or water. Grow the bacteria for one hour at 37˚C. Add 200 µl of the culture to each plate. |
While transferring the worms to a new plate, the agar was flipped in the wrong orientation | It is difficult to transfer a small piece of agar. | The direction of the agar does not matter, worms will leave the chunk and migrate to their food. |
Can not see the worms under the microscope after transfer | Worms require a short amount of time to migrate to plate. | Wait for 5-10 minutes and ovserve under the microscope again. |
Chunk did not contain enough live worms. | Make new chunk of agar from source plate and repeat the transfer process onto the plates. |
The chunked plates containing the worms show a bright white or pink growth | The plates are contaminated. | Prepare a new plate of worms from a clean source plate. |
Transfer a chunk of agar from a clean region of the plate to a fresh NGM agar plate. |
Do not see growth of OP50 on plate after incubation | NGM is a clear agar and OP50 bacteria forms a limited lawn. | Using a loop, gently scrape the top of the agar to check for bacterial growth or smell plate for bacterial order. If no growth is observed, plate more OP50 bacteria. |
Can not count the worms under the microscope | The microscope is set to a higher magnification. | Start with the lower magnification and try to visualize many locations are the plate. |
Too few worms on plate. | Wait three more days before performing the experiment. During this time, be sure to feed the worms every few days be adding one BactoBead™ to 1ml of LB or water. Grow the bacteria for one hour at 37˚C. Add 200 µl of the culture to each plate. |
Can not see worms in the counting chamber | Agar from plate has contaminated worms during washing. | Avoid removing agar from the plate by gently pipetting and avoiding contact with the surface. |
Worms are at the bottom of the tube. | Gently flick the tube to resuspend worms prior to pipetting. |
Need to dispose of the worms and NGM plates | Experiment has been completed. | Plates should be soaked in 10% bleach and discarded according to school regulations. |
After chunking the worms and leaving them at RT, the NGM agar is too thin or does not cover the bottom of the plate | Incorrect volume was poured into the plates. | It is important to have the correct thickness of agar in the plates. Be sure to pour the amount recommended by the protocol. |
The plates were left uncovered and the agar dehydrated. | Keep plates inside of the box. If it is very hot in your classroom, seal plates with parafilm. |
Received worms two or more weeks before performing the experiment | Worms may be dehydrated or starving. | Pour the NGM plates, grow bacteria and chunk the plates into a new plate as soon as possible. |